ADMB Documentation  11.6-git.4513
File List
Here is a list of all files with brief descriptions:
 ad_cif.cppOverloaded cifstream operators for autodif classes
 adglobl.cppDescription not yet available
 adjson.cpp
 adjson.h
 admanip.cppDescription not yet available
 admb_messages.h
 admodel.cppDescription not yet available
 admodel.hDescription not yet available
 adoption.hpp
 adpool.cppDescription not yet available
 adpool.hDescription not yet available
 adrndeff.hDescription not yet available
 adsleep.cppDescription not yet available
 adstring.hpp
 adstring_array.cpp
 alk.cppAge-length probability transition matrix
 amoeba.cppDescription not yet available
 atoi.cpp
 banner.cpp
 baranov.cppRoutines for iteratively solving the Baranov catch equation
 bet_rand.cppDescription not yet available
 betacf_val.hpp
 linad99/bounder.cppDescription not yet available
 df1b2-separable/bounder.cppDescription not yet available
 boundfun.cppCode to implement placing constraints on parameters
 c_ghk.cppDescription not yet available
 cbessel.cppDescription not yet available
 cbetacf.cpp
 cbetai.cpp
 cbetdev.cppDescription not yet available
 cbivnorm.cppDescription not yet available
 ccumdbetainv.cpp
 ccumdexp.cppDescription not yet available
 ccumdlog.cppDescription not yet available
 cgamdens.cppFunctions for gamma probability density; constant objects
 cgamdev.cpp$Id$
 cifstrem.cppImplementation of the cifstream class
 cifstrem.hDefinition of the cifstream class
 cinvcumdt.cppDescription not yet available
 clist.cpp
 clist.h
 clrscr.cppDescription not yet available
 cmpdif10.cppDescription not yet available
 cmpdif11.cppDescription not yet available
 cmpdif2.cppDescription not yet available
 cmpdif3.cppDescription not yet available
 cmpdif4.cppDescription not yet available
 cmpdif5.cppDescription not yet available
 cmpdif6.cppDescription not yet available
 cmpdif7.cppDescription not yet available
 cmpdif8.cppDescription not yet available
 cmpdif9.cppDescription not yet available
 cnegbin.cpp$Id$
 cnorlogmix.cppDescription not yet available
 cnormgam.cppDescription not yet available
 cnormmix.cppDescription not yet available
 combc.cppThis file has routines for the constant type log-factorial, log-binomial, and log-gamma functions for scalar and vector arguments
 combv.cpp$Id$ Author: Unknown
 compare.cppDescription not yet available
 conjprod.cppDescription not yet available
 cranfill.cpp
 cregress.cppDescription not yet available
 cspline.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 cumd_cau.cppDescription not yet available
 cumdist.cppDescription not yet available
 d3_io.cpp
 d3_io1.cpp
 d3arr.cpp
 d3arr1.cpp
 d3arr10.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 d3arr11.cpp
 d3arr12.cppDescription not yet available
 d3arr2a.cpp
 d3arr2b.cpp
 d3arr2c.cpp
 d3arr3.cpp
 d3arr4.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 d3arr5.cppDescription not yet available
 d3arr6.cppDescription not yet available
 d3arr7.cpp
 d3arr8.cpp
 d3arr9.cpp
 d4_io.cpp
 d4_io1.cpp
 d4arr.cpp
 d4arr1.cpp
 d4arr2.cpp
 d4arr3.cppAuthor: David Fournier Copyright (c) 2008-2015 Regents of the University of California
 d5arr.cpp
 d5arr1.cpp
 d5arr3.cppDescription not yet available
 d6arr.cpp
 d6arr1.cpp
 d6arr2.cpp
 d7arr.cpp
 d7arr1.cpp
 d7arr2.cppDescription not yet available
 dbeta.cppBeta density functions
 dbinom.cppBinomial density functions
 ddlist.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 def_eval.cppDescription not yet available
 dep_hess.cppDescription not yet available
 depvars.cppDescription not yet available
 derch.cppDescription not yet available
 df11fun.cpp
 df11fun.h
 df12fun.cppDescription not yet available
 df12fun.hDescription not yet available
 df13fun.cppDescription not yet available
 df13fun.hDescription not yet available
 df1b2bessel.cppDescription not yet available
 df1b2bet.cpp
 df1b2betdev.cppDescription not yet available
 df1b2chkder.cppDescription not yet available
 df1b2cum.cppDescription not yet available
 df1b2f10.cppDescription not yet available
 df1b2f11.cppDescription not yet available
 df1b2f12.cppDescription not yet available
 df1b2f13.cppDescription not yet available
 df1b2f14.cppDescription not yet available
 df1b2f15.cppDescription not yet available
 df1b2f16.cppDescription not yet available
 df1b2f17.cppDescription not yet available
 df1b2f18.cppDescription not yet available
 df1b2f19.cppDescription not yet available
 df1b2f20.cpp$Id$
 df1b2f21.cppDescription not yet available
 df1b2f24.cppDescription not yet available
 df1b2f25.cppDescription not yet available
 df1b2f26.cppDescription not yet available
 df1b2f27.cppDescription not yet available
 df1b2f28.cppDescription not yet available
 df1b2fn2.cppDescription not yet available
 df1b2fn3.cppDescription not yet available
 df1b2fn4.cppDescription not yet available
 df1b2fn5.cppDescription not yet available
 df1b2fn7.cppDescription not yet available
 df1b2fn8.cppDescription not yet available
 df1b2fnl.cppDescription not yet available
 df1b2fnl.hDescription not yet available
 df1b2fun.cppDescription not yet available
 df1b2fun.hDescription not yet available
 df1b2funx.cppDescription not yet available
 df1b2gh.cppDescription not yet available
 df1b2ghmult.cppDescription not yet available
 df1b2glo.cppDescription not yet available
 df1b2im2.cppDescription not yet available
 df1b2im3.cppDescription not yet available
 df1b2im3f.cppDescription not yet available
 df1b2im4.cppDescription not yet available
 df1b2im5.cppDescription not yet available
 df1b2imp.cppDescription not yet available
 df1b2impf.cppDescription not yet available
 df1b2impspf.cppDescription not yet available
 df1b2invcumdbeta.cpp
 df1b2lap.cppDescription not yet available
 df1b2lme.cppDescription not yet available
 df1b2lmn2.cppDescription not yet available
 df1b2loc.cppDescription not yet available
 df1b2loc.hDescription not yet available
 df1b2lp1.cppDescription not yet available
 df1b2lp10.cppDescription not yet available
 df1b2lp11.cppDescription not yet available
 df1b2lp12.cppThis file can probably be removed
 df1b2lp2.cppDescription not yet available
 df1b2lp6.cppDescription not yet available
 df1b2lp7.cppDescription not yet available
 df1b2lp8.cppDescription not yet available
 df1b2lp9.cppDescription not yet available
 df1b2mat.cppDescription not yet available
 df1b2min.cppDescription not yet available
 df1b2min2.cppThis file mainly added for defining double_x - df1b2variable_y, which define in df1b2fun.h
 df1b2min3.cppThis file mainly added for defining df1b2variable_x - double_y, which define in df1b2fun.h
 df1b2negb.cppDescription not yet available
 df1b2norlogmix.cppDescription not yet available
 df1b2normgam.cppDescription not yet available
 df1b2normmix.cppDescription not yet available
 df1b2normmix2.cppDescription not yet available
 df1b2nv1.cppDescription not yet available
 df1b2pow.cppDescription not yet available
 df1b2prb.cppDescription not yet available
 df1b2prc.cppDescription not yet available
 df1b2prd.cppDescription not yet available
 df1b2ptr.cppDescription not yet available
 df1b2qnm.cppDescription not yet available
 df1b2sum.cppDescription not yet available
 df1b2sumc.cppDescription not yet available
 df1b2tweak.cppDescription not yet available
 df32fun.cppDescription not yet available
 df32fun.hDescription not yet available
 df32fun1.cppDescription not yet available
 df33fun.cpp
 df33fun.hDescription not yet available
 df33fun1.cppDescription not yet available
 df3fun.cpp
 df3fun.h
 df3gammp.cpp
 df_file.cpp
 df_file2.cppDescription not yet available
 dfadcif.cpp
 dfgammp.cpp$Id$
 dfinvcumdt.cppDescription not yet available
 dflocmin.cppDescription not yet available
 dflogistic.cppDescription not yet available
 dfpool.cppDescription not yet available
 dfpool.hDescription not yet available
 dfqromb.cppContains routines for numerical integration
 dfsdmat.cppDescription not yet available
 dftweak.cppDescription not yet available
 dgamma.cppGamma density functions
 dinvgamma.cppInverse gamma distribution
 dlnorm.cppLognormal density functions
 dmat.cpp
 dmat0.cpp
 dmat1.cpp
 dmat10.cpp
 dmat12.cpp
 dmat14.cpp
 dmat15.cppDescription not yet available
 dmat16.cppDescription not yet available
 dmat17.cpp
 dmat18.cpp
 dmat2.cpp
 dmat20.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 dmat21.cppDescription not yet available
 dmat22.cpp
 dmat23.cppDescription not yet available
 dmat24.cpp
 dmat25.cppDescription not yet available
 dmat26.cppDescription not yet available
 dmat27.cpp
 dmat28.cppDescription not yet available
 dmat29.cppDescription not yet available
 dmat3.cpp
 dmat30.cppDescription not yet available
 dmat31.cpp
 dmat32.cppDescription not yet available
 dmat33.cppDescription not yet available
 dmat34.cpp
 dmat35.cppDescription not yet available
 dmat36.cppDescription not yet available
 dmat37.cppDescription not yet available
 dmat38.cpp
 dmat4.cpp
 dmat41.cppDescription not yet available
 dmat42.cppThis file deals with the Singular Value Decomposition of a matrix
 dmat43.cpp
 dmat6.cpp
 dmat7.cpp
 dmat8.cppDescription not yet available
 dmat9.cppDescription not yet available
 dmat_a.cppDescription not yet available
 dmat_acc.cppDescription not yet available
 dmat_io.cppDescription not yet available
 dmat_io2.cppDescription not yet available
 dmat_io3.cpp
 dmsort.cppDescription not yet available
 dmultinom.cppMultinomial distribution
 dmvlogistic.cppMultivariate logistic negative log likelihood
 dnbinom.cpp
 dnbinom_tau.cpp
 dnorm.cppNormal density functions
 doublind.cppDescription not yet available
 dpois.cppPoisson density functions
 drancau.cppDescription not yet available
 drangam.cppDescription not yet available
 drannegbin.cppDescription not yet available
 dranpois.cppDescription not yet available
 dsize.cppDescription not yet available
 dunif.cppUniform distribution
 dvar.cppDescription not yet available
 dvec_acc.cppDescription not yet available
 dvec_dif.cpp
 dvec_io1.cppDescription not yet available
 dvec_io2.cppDescription not yet available
 dvect10.cppDescription not yet available
 dvect11.cppDescription not yet available
 dvect12.cpp
 dvect13.cpp
 dvect14.cppDescription not yet available
 dvect15.cpp
 dvect16.cpp
 dvect17.cpp
 dvect18.cpp
 dvect19.cppDescription not yet available
 dvect2.cppDescription not yet available
 dvect20.cppDescription not yet available
 dvect21.cpp
 dvect22.cppDescription not yet available
 dvect23.cppDescription not yet available
 dvect24.cpp
 dvect25.cppDescription not yet available
 dvect26.cppDescription not yet available
 dvect3.cpp
 dvect4.cppDescription not yet available
 dvect5.cpp
 dvect6.cpp
 dvect7.cppDescription not yet available
 dvect8.cppDescription not yet available
 dvect9.cpp
 dvect_io.cppDescription not yet available
 dvector.cppDescription not yet available
 dvector.h
 dveigen.cpp
 dveigenv.cpp
 dvsort.cppHas routines for sorting a dvector
 dvsort2.cpp
 dzinbinom.cpp
 ecolib.h
 eigen.cpp
 eigenv.cpp
 eplogis.cpp// Exponential logistic
 except.cppDescription not yet available
 linad99/expm.cppMatrix exponential function for dvar_matrix
 df1b2-separable/expm.cppMatrix exponential function for df1b2_matrix
 f1b23d1.cppDescription not yet available
 f1b2fnl2.cppDescription not yet available
 f1b2fnl3.cppDescription not yet available
 f1b2fnl4.cppDescription not yet available
 f1b2fnl5.cppDescription not yet available
 f1b2fnl6.cppDescription not yet available
 f1b2lapqd.cppDescription not yet available
 f1b2lndt.cpp
 f1b2ma1.cppDescription not yet available
 f1b2sol2.cpp
 f1b2sol3.cppDescription not yet available
 f1b2solv.cpp
 f1b2trst.cppDescription not yet available
 f1b2v10.cppDescription not yet available
 f1b2v11.cpp
 f1b2v12.cppDescription not yet available
 f1b2vc1.cppDescription not yet available
 f1b2vc11.cpp
 f1b2vc2.cppDescription not yet available
 f1b2vc3.cppDescription not yet available
 f1b2vc4.cppDescription not yet available
 f1b2vc5.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 f1b2vc6.cppDescription not yet available
 f1b2vc7.cppDescription not yet available
 f1b2vc8.cppDescription not yet available
 f1b2vc9.cppDescription not yet available
 f2c.hDescription not yet available
 f3arr.cppDescription not yet available
 f3arr1.cppDescription not yet available
 f3arr10.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 f3arr11.cppDescription not yet available
 f3arr12.cppDescription not yet available
 f3arr13.cpp
 f3arr14.cpp
 f3arr15.cppDescription not yet available
 f3arr16.cppDescription not yet available
 f3arr17.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 f3arr18.cppDescription not yet available
 f3arr19.cppDescription not yet available
 f3arr2.cppDescription not yet available
 f3arr3.cpp
 f3arr4.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 f3arr5.cppDescription not yet available
 f3arr6.cpp
 f3arr7.cpp
 f3arr8.cpp
 f3arr9.cppDescription not yet available
 f4_io.cpp
 f4_io1.cpp
 f4arr.cpp
 f4arr1.cppDescription not yet available
 f4arr2.cppDescription not yet available
 f4arr3.cppDescription not yet available
 f5arr.cpp
 f5arr1.cppDescription not yet available
 f5arr2.cppDescription not yet available
 f5arr3.cppDescription not yet available
 f6arr.cppDescription not yet available
 f6arr1.cppDescription not yet available
 f6arr2.cppDescription not yet available
 f7arr.cppDescription not yet available
 f7arr1.cppDescription not yet available
 f7arr2.cppDescription not yet available
 factors.cppSupport functions for factor
 factors.hSupport functions for factor
 fill.cppFills a matrix with a vectorThis function fills a matrix m with a vector v
 fmm.cppDescription not yet available
 fmm_cont.cppDescription not yet available
 fmm_disp.cppDescription not yet available
 fmmt1.cppDescription not yet available
 fmmtr1.cppDescription not yet available
 fquadpri.cpp
 franpois.cppDescription not yet available
 ftweak.cppDescription not yet available
 fvar.hppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 fvar1.cppDescription not yet available
 fvar2.cppDescription not yet available
 fvar3_io.cppI/o operations for class dmatrix
 fvar_a10.cppDescription not yet available
 fvar_a11.cpp
 fvar_a13.cppDescription not yet available
 fvar_a14.cppDot-product fpor dvar_vector and sum for dvar_vector and dvar_matrix
 fvar_a15.cppDescription not yet available
 fvar_a16.cppDescription not yet available
 fvar_a17.cppDescription not yet available
 fvar_a18.cppDescription not yet available
 fvar_a19.cppDescription not yet available
 fvar_a20.cppDescription not yet available
 fvar_a21.cppDescription not yet available
 fvar_a22.cppDescription not yet available
 fvar_a23.cppDescription not yet available
 fvar_a24.cppDescription not yet available
 fvar_a25.cppDescription not yet available
 fvar_a26.cppDescription not yet available
 fvar_a27.cppDescription not yet available
 fvar_a28.cpp
 fvar_a29.cppDescription not yet available
 fvar_a30.cppDescription not yet available
 fvar_a31.cppDescription not yet available
 fvar_a32.cppDescription not yet available
 fvar_a33.cppDescription not yet available
 fvar_a34.cppDescription not yet available
 fvar_a35.cppDescription not yet available
 fvar_a36.cppDescription not yet available
 fvar_a37.cppDescription not yet available
 fvar_a38.cppDescription not yet available
 fvar_a39.cppDescription not yet available
 fvar_a40.cppDescription not yet available
 fvar_a41.cppDescription not yet available
 fvar_a42.cppDescription not yet available
 fvar_a43.cppDescription not yet available
 fvar_a44.cppDescription not yet available
 fvar_a45.cppDescription not yet available
 fvar_a46.cppDescription not yet available
 fvar_a47.cppDescription not yet available
 fvar_a48.cppDescription not yet available
 fvar_a49.cppDescription not yet available
 fvar_a50.cppDescription not yet available
 fvar_a51.cppDescription not yet available
 fvar_a52.cpp
 fvar_a53.cppDescription not yet available
 fvar_a54.cppDescription not yet available
 fvar_a55.cppDescription not yet available
 fvar_a56.cppDescription not yet available
 fvar_a57.cppDescription not yet available
 fvar_a58.cpp
 fvar_a59.cpp
 fvar_a60.cppDescription not yet available
 fvar_a61.cppDescription not yet available
 fvar_a62.cppDescription not yet available
 fvar_ar1.cpp
 fvar_ar3.cppDescription not yet available
 fvar_ar7.cppDescription not yet available
 fvar_ar8.cppDescription not yet available
 fvar_arr.cppDescription not yet available
 fvar_dif.cpp
 fvar_fn.cppOverloads of math library functions for variable arguments
 fvar_fn1.cppMore overloads of math library functions for variable arguments
 fvar_fn2.cppDescription not yet available
 fvar_io.cppDescription not yet available
 fvar_io2.cppDescription not yet available
 fvar_m10.cppDescription not yet available
 fvar_m11.cppDescription not yet available
 fvar_m12.cppDescription not yet available
 fvar_m13.cppDescription not yet available
 fvar_m14.cppDescription not yet available
 fvar_m15.cpp
 fvar_m18.cppDescription not yet available
 fvar_m19.cppDescription not yet available
 fvar_m20.cpp
 fvar_m21.cppDescription not yet available
 fvar_m22.cppDescription not yet available
 fvar_m23.cppDescription not yet available
 fvar_m24.cpp
 fvar_m27.cppDescription not yet available
 fvar_m28.cppDescription not yet available
 fvar_m29.cppAuthor: David Fournier Copyright (c) 2008-2012 Regents of the University of California
 fvar_m30.cppDescription not yet available
 fvar_m31.cppDescription not yet available
 fvar_m32.cppDescription not yet available
 fvar_m33.cppDescription not yet available
 fvar_m34.cppDescription not yet available
 fvar_m35.cppDescription not yet available
 fvar_m36.cppDescription not yet available
 fvar_m37.cpp
 fvar_m38.cppDescription not yet available
 fvar_m39.cppDescription not yet available
 fvar_m40.cppDescription not yet available
 fvar_m41.cppDescription not yet available
 fvar_m42.cpp
 fvar_m43.cppDescription not yet available
 fvar_m44.cppDescription not yet available
 fvar_m45.cpp
 fvar_m46.cppDescription not yet available
 fvar_m47.cppDescription not yet available
 fvar_m48.cppDescription not yet available
 fvar_m50.cppDescription not yet available
 fvar_m51.cppDescription not yet available
 fvar_m52.cppDescription not yet available
 fvar_m53.cppDescription not yet available
 fvar_m57.cppDescription not yet available
 fvar_ma1.cppDescription not yet available
 fvar_ma2.cppDescription not yet available
 fvar_ma3.cppDescription not yet available
 fvar_ma4.cpp
 fvar_ma6.cppDescription not yet available
 fvar_ma7.cppDescription not yet available
 fvar_ma8.cppDescription not yet available
 fvar_ma9.cppDescription not yet available
 fvar_mat.cpp
 fvar_o10.cppDescription not yet available
 fvar_o11.cppDescription not yet available
 fvar_op2.cppDescription not yet available
 fvar_op3.cppDescription not yet available
 fvar_op4.cppDescription not yet available
 fvar_op5.cppPrevariable operations
 fvar_op7.cpp
 fvar_op8.cppDescription not yet available
 fvar_op9.cppDescription not yet available
 fvar_opr.cppOverloads of arithmetic operators for variable arguments
 fvara_io.cppDescription not yet available
 fvarb_io.cppDescription not yet available
 fvarm1_i.cppI/o operations for class dvar_matrix
 fvarm_io.cppDescription not yet available
 fvma_acc.cppDescription not yet available
 gammdev.cppDescription not yet available
 gaussher.cppThis file has routines used for Gauss-Hermite Quadrature and Gauss-Legendre Quadrature
 gdbprintlib.cppSource code for functions for printing ADMB objects during GDB sessions
 gdbprintlib.hFunction prototypes for printing ADMB objects during GDB sessions
 generalized_Ricker1.cpp
 generalized_Ricker2.cpp
 getbigs.cppDescription not yet available
 getopt.cppDescription not yet available
 Gompertz.cpp
 gradchk.cppDescription not yet available
 gradient_structure.h
 gradstak.cppDescription not yet available
 gradstrc.cppDescription not yet available
 gs_set.cppFunctions for setting memory allocation and array limits
 gsl_ran_gamma.cpp
 gst_read.cppDescription not yet available
 Hassell.cpp
 Hill.cpp
 histgram.cppDescription not yet available
 hmc.cppAuthor: Cole Monnahan Copyright (c) 2016 ADMB Foundation
 hmc_functions.cpp
 HollingII.cpp
 HollingIII.cpp
 HollingIV.cpp
 hs_sparse.cpp
 humung.cppDescription not yet available
 hybmcmc.cppDescription not yet available
 i3_io.cpp
 i3arr.cpp
 i3arr8.cpp
 i4arr.cpp
 i4io.cpp
 i5arr.cpp
 i5io.cpp
 imat.cpp
 imat1.cppDescription not yet available
 imat10.cpp
 imat2.cpp
 imat3.cppDescription not yet available
 imat4.cpp
 imat5.cpp
 imat6.cpp
 imat7.cpp
 imat8.cpp
 imat9.cppDescription not yet available
 imat_a.cpp
 imat_io.cppDescription not yet available
 imatrix.h
 imsort.cppDescription not yet available
 indextyp.cppDescription not yet available
 integrate.cpp
 integrate.hpp
 integrate_wrap.hpp
 linad99/invlogit.cppInverse logit function
 df1b2-separable/invlogit.cppInvlogit function
 ivec.cpp
 ivec2.cppDescription not yet available
 ivec3.cpp
 ivec4.cppDescription not yet available
 ivec7.cpp
 ivec8.cpp
 ivec9.cpp
 ivec_io1.cpp
 ivect10.cpp
 ivect11.cpp
 ivect6.cppContains ivector sum and pow functions
 ivect_io.cppI/o operations for class ivector
 ivector.cppDescription not yet available
 ivector.h
 ivsort.cppHas routines for sorting an ivector
 ivsort2.cpp
 jacob2.cppDescription not yet available
 jacob3.cppDescription not yet available
 jacobclc.cppDescription not yet available
 lbfgs.cppDescription not yet available
 libtype.cppDescription not yet available
 lmat.cppDescription not yet available
 lmat1.cppDescription not yet available
 lmat2.cppDescription not yet available
 lmat3.cppDescription not yet available
 lmat4.cppDescription not yet available
 lmat5.cppDescription not yet available
 lmat6.cppDescription not yet available
 lmat7.cppDescription not yet available
 lmat_a.cppDescription not yet available
 lmat_io.cppDescription not yet available
 lmnewton.cpp
 statslib/logistic.cpp
 ecolib/logistic.cpp
 logistic3.cpp
 logisticK.cpp
 logit.cppDescription not yet available
 lvec1.cppDescription not yet available
 lvec2.cppDescription not yet available
 lvec_io1.cppDescription not yet available
 lvect_io.cppDescription not yet available
 lvector.cppDescription not yet available
 makesub.cppDescription not yet available
 maxmin.cppDescription not yet available
 mc_scale.cppDescription not yet available
 mceval.cppDescription not yet available
 mfexp.cpp
 mfexpcon.cpp
 mfupper.cppDescription not yet available
 Michaelis_Menten1.cpp
 Michaelis_Menten2.cpp
 minim.cpp
 mod_hess.cpp
 mod_mc.cpp
 mod_mc1.cpp
 mod_mc2.cpp
 mod_mc3.cpp
 mod_mc4.cpp
 mod_pmin.cpp
 mod_prof.cpp
 mod_rhes.cppDescription not yet available
 mod_sd.cpp
 model.cpp
 model10.cpp
 model11.cpp
 model12.cpp
 model13.cpp
 model14.cpp
 model15.cpp
 model15i.cpp
 model16.cpp
 model17.cpp
 model19.cpp
 model2.cpp
 model20.cpp
 model21.cpp
 model22.cpp
 model23.cpp
 model24.cpp
 model26.cpp
 model27.cpp
 model28.cpp
 model29.cpp
 model3.cpp
 model30.cpp
 model31.cpp
 model32.cpp
 model33.cpp
 model34.cpp
 model35.cpp
 model36.cpp
 model37.cpp
 model4.cpp
 model40.cpp
 model41.cpp
 model42.cpp
 model43.cpp
 model44.cpp
 model45.cpp
 model46.cpp
 model47.cpp
 model48.cpp
 model49.cppDescription not yet available
 model5.cpp
 model50.cpp
 model51.cpp
 model52.cpp
 model53.cpp
 model53x.cpp
 model6.cpp
 model7.cpp
 model8.cpp
 model9.cpp
 modhdet.cpp
 modspmin.cpp
 monomolecular.cpp
 monte.cpp
 montebds.cpp
 multifan.cpp/Robust normal approximation to the multinomial distribution
 multiindex.cppDescription not yet available
 newdar.cpp
 newfmin.cppSource code for quasi-Newton function minimizer
 newhand.cpp
 newmodm2.cpp
 newmodm3.cpp
 newmodm4.cpp
 newmodm5.cpp
 newmodmn.cpp
 newreg2.cppDescription not yet available
 nmonte.cpp
 nnewmod2.cpp
 nocontrib.h
 nonrectangular_hyperbola.cpp
 normmix.cppDescription not yet available
 normmix2.cppDescription not yet available
 nuts.cppAuthor: Cole Monnahan Copyright (c) 2016 ADMB Foundation
 nvarcall.cppDescription not yet available
 optmatch.cppOption_match utilities used for parsing command line arguments
 orthply2.cppDescription not yet available
 orthpoly.cppDescription not yet available
 param_init_bounded_number_matrix.cpp
 param_init_bounded_number_matrix.h
 pearsonresiduals.cpp// Pearson residuals
 posfunc.cppPosfun(...) source code for constant arguments
 posfunv.cppPosfun(...) source code for variable arguments
 pow_vectorized_RE.cpp
 prmonte.cpp
 prn_t.h
 ptr2.cppDescription not yet available
 ptr_vec.cppDescription not yet available
 qfc_est.cppNegative log likelihood functions with other functions useful for model estimation
 qfc_sim.cppFunctions useful for simulation model in admb
 qfclib.h
 qsort.hHeader for qsort
 quadpri.cppDescription not yet available
 randeff.cpp
 ranf_ni.cppDescription not yet available
 ranf_ni2.cppDescription not yet available
 ranfill.cppDescription not yet available
 ranfill1.cppRoutines for filling objects (matrices and vectors)
 ranfill2.cppDescription not yet available
 rannegbn.cppDescription not yet available
 Ricker.cpp
 rmvlogistic.cppRandom multivariate logistic negative log likelihood
 rngen.cppDescription not yet available
 scbound.cppDescription not yet available
 scbound1.cppDescription not yet available
 sdmat.cppDescription not yet available
 set.cppDescription not yet available
 setin.cppDescription not yet available
 sgradclc.cppFunctions to compute gradient from the global gradient_structure
 shape.cppDescription not yet available
 shared.cpp
 shared1.cpp
 Shepherd.cpp
 signalh.cppDescription not yet available
 size.cpp
 statsLib.hLibrary of statistic functions
 str.cpp
 str_aio.cpp
 strcase.cpp
 strcase2.cpp
 string.cpp
 string1.cpp
 string2.cpp
 string2a.cpp
 string3.cpp
 string4.cpp
 string5.cpp
 string5a.cpp
 string6.cpp
 studentT.cppStudent T density functions
 suballoc.cpp
 tdev.cppDescription not yet available
 tensprod.cppDescription not yet available
 test_trust.cppDescription not yet available
 theta_logistic.cpp
 timer.cppDescription not yet available
 tiny_ad.hpp
 tiny_vec.hpp
 tiny_wrap.hpp
 tsdfpool.cppDescription not yet available
 ufstream.cppDescription not yet available
 v_ghk.cppDescription not yet available
 val.cpp
 vbessel.cppDescription not yet available
 vbeta.cppDescription not yet available
 vbetacf.cpp
 vbetai.cpp
 vbetdev.cppDescription not yet available
 vbivnorm.cppDescription not yet available
 vcubicspline.cppCubic spline functions
 vcumdbetainv.cpp
 vcumdcau.cppDescription not yet available
 vcumdexp.cppDescription not yet available
 vcumdist.cppDescription not yet available
 vcumdlog.cppDescription not yet available
 vec_io.cpp
 vector_shapex.h
 Vectorize.hppMacros to do vectorization
 linad99/vgamdens.cppFunctions for gamma probability density; differentiable (variable) objects
 df1b2-separable/vgamdens.cpp
 vgamdev.cpp
 vinvcumdt.cppDescription not yet available
 vnegbin.cppPoisson and negative binomial probability density functions for differentiable objects
 vnorlogmix.cppDescription not yet available
 vnormgam.cppDescription not yet available
 vrannegbin.cppDescription not yet available
 vregress.cppDescription not yet available
 vspline.cppContains routines for cubic spline interpolation for variable types
 vtdev.cppDescription not yet available
 xfmmtr1.cpp
 xgradclc.cppDescription not yet available
 xmodelm3.cpp
 xmodelm4.cpp
 xmodelm5.cpp
 xmonte2.cpp
 xxmcmc.cpp